Browse of TCMCG066C26016 protein

CDS

Accession Number	TCMCG066C26016
gbkey	CDS
Protein Id	XP_034605383.1
Location	complement(join(6963993..6964107,6965064..6965431,6968917..6969102,6970710..6970889,6970983..6971111,6971193..6971423,6971718..6971795,6971883..6971948,6972295..6972375,6972867..6973639,6976145..6976341,6979258..6979352,6980807..6980926,6983447..6983524,6984944..6985069,6985265..6985402,6987813..6987929,6988032..6988083,6988162..6988293,6989700..6989752,6989848..6989943,6990795..6990940,6991915..6992050,6992322..6992471))
Gene	LOC117865322
GeneID	117865322
Organism	Setaria viridis

Protein

Length	1280aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA633601
db_source	XM_034749492.1
Definition	probable cleavage and polyadenylation specificity factor subunit 1 isoform X7 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Cleavage and polyadenylation specificity factor subunit 1
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K14401        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03015        [VIEW IN KEGG] map03015        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003729        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006378        [VIEW IN EMBL-EBI] GO:0006379        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006397        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016071        [VIEW IN EMBL-EBI] GO:0031123        [VIEW IN EMBL-EBI] GO:0031124        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043631        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0090305        [VIEW IN EMBL-EBI] GO:0090501        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGCATTGCTTTGAAGGCCCTGATTGGCTGCATCTGAAAAGAGGCAGGGAATCGTTTGCCTGGGGTCCTGTCATAAAAGCGGATCCTCAAGGCAGATGTGGTGCTGCACTTGTTTATGGACTGCAGATGGTTATTCTGCAAGCAGCGCAGGTTGGGCAGAGCTTAGTTGGAGAAGATGAACCAACACGTGTGTTGAGTTCAGCTGCTGTTCGGATTGATTCTTCATATGTGATCAACTTGCGTCTTTTAGAAATAAATCACATCAAAGATTTTACATTTGTGCATGGTTATATTGAGCCTGTGTTGGTCATACTTCATGAGCAAGAGCCTACATGTGCTGGGCGTATCTCATCAAAGAACCAAACATGCATGATATCTGCATTTAGTATAAGTATGAGTTTAAAGCAACATCCGATGATATGGTCTGCTGCTAAACTGCCGCATGATGCATACCAACTTCTTGCAGTTCCTCCGCCTATTAGCGGCATTCTTGTGATCTGTGCAAATTCGATCCATTATCATAGTCAGTCCACATCTTGTTCACTTGCCTTAAACAGTTTTTCATCCCAGCCTGATGGCAGCCCAGAAACTCCTAAAACAAGTTTCTGTGTGGAGCTTGATGCGGCTAAAGCAACATGGTTATCCCATGACATCGTAATGTTTTCATCAAAGAATGGAGAAATATTACTACTAACAGTGGTTTATGATGGGCGAGCTGTGCAAAGATTAGATCTTATGAAATCAAAGGCATCTATTCTCAGTTCGGGTGCTACAACTCTTGGAAGTTCGTTCTTCTTTCTTGGCAGTCGTCTGGCAGACAGCCTTCTTGTGCAATTTTCCTGTGGGGTGCCAACATCTATTCTACCTGATCTAACAGATGAGTCTGCTGATATTGAAGGTGACCTGCCTTTCGCAAAGCGTCTAAAAAGGATTCCCTCTGATGTCTTACAAGATGTGAACAGTGTTGAGGAACTTTCTTTTCATAATAATACAGTCCCAGATAGTCTAGATTCAGCACAGAAGATCTCATTTGTTGTGAGAGATGCTCTGATCAATGTTGGTCCTCTGAAAGATTTTGCATATAGTTTAAGAACTAATTCGGATCCCGATGCGGCAGGCATTGCAAAACAAAGCAATTATGAGTTGGTGTGTTGTTCTGGTCATGGAAAGAATGGAACACTGTCAGCTCTTCAACAATCTATTCGCCCAGATTTAATTACCGAGGTAGAACTACCAAGTTGCACAGGTATTTGGACAGTTTACTACAAGAGTTCTCGTGGAATTACAACCGAGGATAATGAATATCATGCTTATTTGATAATAAGCCTAGAAAACCGCACAATGGTACTTCAGACAGGTGATGATCTAGGAGAAGTTACTGAAACAGTCGATTATAATGTTCAAACAAACACAATTACTGCTGGTAACTTATTTGGGAGACGACGTGTCATACAGGTATACGCCAAGGGTGCTCGTGTGCTTGATGGTTCCTTCATGACACAAGAGCTAACCTTCACTATGCAAACTTCGGAATCTTCATTGAGTTCTGAGCCTCTTGCTGCCGCCTCTGCTTCAATTGCAGATCCATATGTTCTTTTGAAGATGGTTGATGGAACCATTCGACTTCTCATTGGAGATCATTCTACCTGTACTATTTCTTTTAATGCTCCTGCCACATTTGCAAGCCCAAGTGAGCGAATATCTTCATGTACACTTTACCATGACAGAGGCCCTGAGCCATGGCTAAGAAAGGCGCGTACTGATGCATGGCTATCCGCTGGTATTGGAGAGGCTACTGATGGCAATGATAGTTCTTCTCATGATCAATCAGATATATATTGCATAATTTGTTATGAAAGCGGTAAACTGGAAATTTTTGAAGTGCCCAGTTTTAAATGTGTGTTCTCTGTGGAAAATTTTGTTTCCGGACCAGCTATTTTGTTTGATGACGTTTCCCATACTTCTACCAAGGATGCTGTAATAGTAGTTCCAGATGCTACTAAAGTTTCTGTGAAGAAAGAGGAATCAAATAGCATTAAGATAGTTGAGCTTGCAATGCATAGATGGTCTGGTCTGTTCAGTCATCCATTCCTCTTCGGATTATTGAATGATGGGACATTTTTGTGTTACCACGCTTATTGTTATGAAGGTTCAGAAAGTAACGCACAATGTGCTCCTTTGTCACCTCATGGTTCATCTGATCTTGACAATGCCAGTGATTCAAGACTAAAAAATTTAAGATTTCGTCGAGTTTCAATTGATGTCTCGTCACGAGATGACATATCAAGTTTTGCACGACCAAGAATAACAATTTTCAATAATGTTGGAGGTTATGAGGGATTATTTCTTTCTGGCCCGAGGCCAACCTGGGTTTTTGTTTGCCGACAACGATTTCGGGTGCATCCACAGTTGTGTGATGGTCCCATTGTAGCCTTTACCGTTCTCCACAATGTCAATTGTTGCCATGGCCTTATATATGTTACATCACAGGGTTTTCTGAAGATATGCCAGTTGCCTTCAGCATATAACTATGACAACTACTGGCCTGTTCAAAAGGTCCCCTTGCATGCCACCCCACATCAGGTCACATATTATGCAGAGCAGTCCCTCTATCCACTTATCGTCTCCGTTCCTGTTGTTCGCCCCCTAAATCAAGTTCTTTCTTCTATGGCTGATCAAGAATTGGGTCTGCACACAGAGAATGATGTTACAGTTGGTGATGACCTCCAAAAGGTTTATACTGTTGATGAATTTGAGGTTCGCATTATGGAGTTGGAGAAAGCCAGTGGACATTGGGAGACAAGGGTCACCATTCCGATGCAACCATTTGAAAATGCTCTAACAGTGCGCATTGTTACATTGCAAAACACAACCACAAAGGAAAATGAAACCCTGATGGCGATTGGAACTGCTTATGTTCAAGGGGAGGATGTTGCTGCTAAAGGAAGGGTCCTTCTGTTCTCTTTCAGTAAAAGTGAAAATTCTCAGAATCTGTTTCAGGTTAGGGAAGTTTACTCAAAAGAGAGTAAAGGTGCTGTATCAGCTGTTGCCTCTCTTCAAGGTCATCTACTGATAGCTTCTGGTCCTAAGATCACACTGAACAAATGGACTGGCTCTGAATTGACCGCTGTTGCATTCTATGATGCCCCGTTGCATGTTGTGAGCCTGAACATTGTGAAAAACTTTGTTTTGTTTGGTGATATTCACAAAAGCATATATTTTCTTAGCTGGAAGGAGCAAGGTTCTCAATTGAGTCTTCTGGCAAAAGATTTTGGGTCACTTGATTCTTTTGCAACTGAGTTTTTAATTGATGGAAGCACCTTGAGCCTTGTAGTTTCAGATTCTGATAAGAATGTGCAGATTTTCTACTATGCCCCCAAGATGGTGGAGAGCTGGAAGGGGCAAAAGCTCCTTTCCAGAGCAGAGTTTCATGTTGGAGCCAATGTGGCGAAGTTTTTGAGACTACAGATGTTGCCCACACAAGGATTGGTATCTGAAAAGACAAATCGTTTTGCTCTTGTATTTGGAACGTTGGATGGTGGCATTGGGTGCATTGCACCTGTTGATGAATTAACGTTTCGTCGGCTCCAGAGCTTACAGAGGAAGCTTGTAGATGCTGTCCCCCACGTGTGTGGCCTGAATCCAAGATCATTTAGGCATTTTAAGTCCAATGGGAAGGCACATCGACCTGGACCGGATAACATCATTGACTTTGAGCTTCTTTCTCACTATGAGATGATGTCTTTAGAAGAACAGCTTGATATTGCCCAACAGATTGGAACCACCCGCTCACAAATTCTTTCCAATTTCAGTGACTTTTCATTGGGCACGAGTTTCTTGTAA

Protein:   MHCFEGPDWLHLKRGRESFAWGPVIKADPQGRCGAALVYGLQMVILQAAQVGQSLVGEDEPTRVLSSAAVRIDSSYVINLRLLEINHIKDFTFVHGYIEPVLVILHEQEPTCAGRISSKNQTCMISAFSISMSLKQHPMIWSAAKLPHDAYQLLAVPPPISGILVICANSIHYHSQSTSCSLALNSFSSQPDGSPETPKTSFCVELDAAKATWLSHDIVMFSSKNGEILLLTVVYDGRAVQRLDLMKSKASILSSGATTLGSSFFFLGSRLADSLLVQFSCGVPTSILPDLTDESADIEGDLPFAKRLKRIPSDVLQDVNSVEELSFHNNTVPDSLDSAQKISFVVRDALINVGPLKDFAYSLRTNSDPDAAGIAKQSNYELVCCSGHGKNGTLSALQQSIRPDLITEVELPSCTGIWTVYYKSSRGITTEDNEYHAYLIISLENRTMVLQTGDDLGEVTETVDYNVQTNTITAGNLFGRRRVIQVYAKGARVLDGSFMTQELTFTMQTSESSLSSEPLAAASASIADPYVLLKMVDGTIRLLIGDHSTCTISFNAPATFASPSERISSCTLYHDRGPEPWLRKARTDAWLSAGIGEATDGNDSSSHDQSDIYCIICYESGKLEIFEVPSFKCVFSVENFVSGPAILFDDVSHTSTKDAVIVVPDATKVSVKKEESNSIKIVELAMHRWSGLFSHPFLFGLLNDGTFLCYHAYCYEGSESNAQCAPLSPHGSSDLDNASDSRLKNLRFRRVSIDVSSRDDISSFARPRITIFNNVGGYEGLFLSGPRPTWVFVCRQRFRVHPQLCDGPIVAFTVLHNVNCCHGLIYVTSQGFLKICQLPSAYNYDNYWPVQKVPLHATPHQVTYYAEQSLYPLIVSVPVVRPLNQVLSSMADQELGLHTENDVTVGDDLQKVYTVDEFEVRIMELEKASGHWETRVTIPMQPFENALTVRIVTLQNTTTKENETLMAIGTAYVQGEDVAAKGRVLLFSFSKSENSQNLFQVREVYSKESKGAVSAVASLQGHLLIASGPKITLNKWTGSELTAVAFYDAPLHVVSLNIVKNFVLFGDIHKSIYFLSWKEQGSQLSLLAKDFGSLDSFATEFLIDGSTLSLVVSDSDKNVQIFYYAPKMVESWKGQKLLSRAEFHVGANVAKFLRLQMLPTQGLVSEKTNRFALVFGTLDGGIGCIAPVDELTFRRLQSLQRKLVDAVPHVCGLNPRSFRHFKSNGKAHRPGPDNIIDFELLSHYEMMSLEEQLDIAQQIGTTRSQILSNFSDFSLGTSFL